Research workbench
Polypeptide chain release factor 2 (RF2) from escherichia COLI
Analyse Polypeptide chain release factor 2 (RF2) from escherichia COLI in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1GQE
- Type
- protein
- Length
- 362 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Release factor 2
- UniProt
- P07012
- Pockets
- 4 · best druggability 0.63
Structure
x-ray diffraction · 1 distinct chain · 51% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Release factor 2 | protein | 362 | 51% helix, 21% strand | P07012 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 348 | 0.63 | 0.79 | 28 | empty |
| 2 | 232 | 0.51 | 0.76 | 34 | empty |
| 3 | 75 | 0.42 | 0.80 | 17 | empty |
| 4 | 84 | 0.36 | 0.76 | 18 | empty |
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 1GQE · Polypeptide Chain Release Factor 2 (RF2) from Escherichia coli · the same entry in another collection · chain A against A, TM-score 1.00
- P07012 · AlphaFold monomer V2.0 prediction for peptide chain release factor RF2 (P07012) · a predicted model of the same protein · chain A against A, TM-score 0.50
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P07012
- Elsewhere: RCSB PDB 1GQE · PDBe 1GQE · UniProt P07012
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