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Disulphide-mediated tetramer of T4 lysozyme R76C/R80C by synthetic symmetrization

Analyse Disulphide-mediated tetramer of T4 lysozyme R76C/R80C by synthetic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3SBB
Type: protein
Length: 163 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lysozyme
EC: 3.2.1.17
UniProt: P00720
Ligands: CL
Pockets: 1 · best druggability 0.33

Structure

x-ray diffraction · 1 distinct chain · 64% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
C	Lysozyme (EC 3.2.1.17)	protein	163	64% helix, 9% strand	P00720

Ligands and binding sites

CL · Chloride ion · ion · 3 copies · chains C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	91	0.33	0.74	20	empty

Compared structures

3SBB · Disulphide-mediated Tetramer of T4 Lysozyme R76C/R80C by Synthetic Symmetrization · the same entry in another collection · chain C against C, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00720
Elsewhere: RCSB PDB 3SBB · PDBe 3SBB · UniProt P00720

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