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Crystal structure of the ryr domain of the rabbit ryanodine receptor

Analyse Crystal structure of the ryr domain of the rabbit ryanodine receptor in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3RQR
Type: protein
Length: 193 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ryanodine receptor 1; (UNK)(UNK)(UNK)(UNK)
UniProt: P11716
Pockets: 1 · best druggability 0.36

Structure

x-ray diffraction · 2 distinct chains · 51% helix, 7% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ryanodine receptor 1	protein	189	52% helix, 6% strand	P11716
U	(UNK)(UNK)(UNK)(UNK)	protein	4	0% helix, 25% strand	—

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	90	0.36	0.75	19	empty

Interfaces

1 interface between chains.

A–U · 223 Å² buried · 2 hydrogen bonds · protein-protein

Compared structures

3RQR · Crystal structure of the RYR domain of the rabbit ryanodine receptor · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P11716
Elsewhere: RCSB PDB 3RQR · PDBe 3RQR · UniProt P11716

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