Research workbench
Crystal structure of klebsiella pneumoniae hpxo complexed with FAD and uric acid
Analyse Crystal structure of klebsiella pneumoniae hpxo complexed with FAD and uric acid in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3RP7
- Type
- protein
- Length
- 389 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flavoprotein monooxygenase
- UniProt
- A6T923
- Ligands
- URC, FAD
- Pockets
- 1 · best druggability 0.78
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flavoprotein monooxygenase | protein | 389 | 39% helix, 25% strand | A6T923 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 943 | 0.78 | 0.80 | 82 | URC, FAD |
Modifications
Observed in the structure: 11 modified (engineered).
Compared structures
- 3RP7 · Crystal Structure of Klebsiella pneumoniae HpxO complexed with FAD and uric acid · the same entry in another collection · chain A against A, TM-score 1.00
- A6T923 · AlphaFold monomer V2.0 prediction for FAD-dependent urate hydroxylase (A6T923) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6T923
- Elsewhere: RCSB PDB 3RP7 · PDBe 3RP7 · UniProt A6T923
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