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Ternary complex of DNA polymerase beta with a gapped DNA containing (SYN)8ODG at template position paired with non-hydrolyzable datp analog (dapcpp)

Analyse Ternary complex of DNA polymerase beta with a gapped DNA containing (SYN)8ODG… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3RJF
Type
protein + DNA
Length
357 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P06746

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein326—P06746
T—dna16——
P—dna10——
D—dna5——

Compared structures

  • 3RJF · Ternary complex of DNA Polymerase Beta with a gapped DNA containing (syn)8odG at template… · the same entry in another collection · chain A against A, TM-score 1.00
  • P06746 · AlphaFold monomer V2.0 prediction for DNA polymerase beta (P06746) · a predicted model of the same protein · chain A against A, TM-score 0.94

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