Research workbench
Reduced native intermediate of the multicopper oxidase cueo
Analyse Reduced native intermediate of the multicopper oxidase cueo in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3QQX
- Type
- protein
- Length
- 474 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Blue copper oxidase cueo
- UniProt
- P36649
- Ligands
- CU1, CU, O
- Pockets
- 4 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 10% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Blue copper oxidase cueo | protein | 474 | 10% helix, 41% strand | P36649 |
Ligands and binding sites
- CU1 · Copper (I) ion · metal · 5 copies · chains A
- CU · Copper (II) ion · metal · 3 copies · chains A
- O · Oxygen atom · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 112 | 0.47 | 0.79 | 28 | empty |
| 2 | 111 | 0.42 | 0.77 | 22 | empty |
| 3 | 50 | 0.40 | 0.83 | 19 | empty |
| 4 | 88 | 0.35 | 0.75 | 19 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P36649
- Elsewhere: RCSB PDB 3QQX · PDBe 3QQX · UniProt P36649
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