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Ggvlvn segment from human prostatic acid phosphatase residues 260-265, involved in semen-derived enhancer of viral infection

Analyse Ggvlvn segment from human prostatic acid phosphatase residues 260-265, involved… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3PPD
Type
protein
Length
6 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Ggvlvn peptide, amyloid forming segment
UniProt
P15309
Ligands
ZN

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AGgvlvn peptide, amyloid forming segmentprotein60% helix, 0% strandP15309

Ligands and binding sites

  • ZN · Zinc ion · metal · chains A
  • ACY · Acetic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 3PPD · GGVLVN segment from Human Prostatic Acid Phosphatase Residues 260-265, involved in… · the same entry in another collection · chain A against A, TM-score 1.00
  • P15309 · AlphaFold monomer V2.0 prediction for prostatic acid phosphatase (P15309) · a predicted model of the same protein · chain A against A, TM-score 0.61

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