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Iron-catalyzed oxidation intermediates captured in a DNA repair dioxygenase

Analyse Iron-catalyzed oxidation intermediates captured in a DNA repair dioxygenase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3O1R
Type
protein + DNA
Length
227 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P05050

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein202—P05050
B—dna12——
C—dna13——

Compared structures

  • 3O1R · Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase · the same entry in another collection · chain A against A, TM-score 1.00
  • P05050 · AlphaFold monomer V2.0 prediction for alpha-ketoglutarate-dependent dioxygenase alkb… · a predicted model of the same protein · chain A against A, TM-score 0.99

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