Research workbench
CBF5-NOP10-GAR1 complex binding with 17MER RNA containing aca trinucleotide
Analyse CBF5-NOP10-GAR1 complex binding with 17MER RNA containing aca trinucleotide in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3MQK
- Type
- protein + RNA
- Length
- 477 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q7LWY0, Q8U1R4, Q8U029
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 328 | — | Q7LWY0 |
| B | — | protein | 52 | — | Q8U1R4 |
| C | — | protein | 75 | — | Q8U029 |
| D | — | rna | 13 | — | — |
| E | — | rna | 9 | — | — |
Compared structures
- 3MQK · Cbf5-Nop10-Gar1 complex binding with 17mer RNA containing ACA trinucleotide · the same entry in another collection · chain B against B, TM-score 1.00
- Q7LWY0 · AlphaFold monomer V2.0 prediction for probable tRNA pseudouridine synthase B (Q7LWY0) · a predicted model of the same protein · chain A against A, TM-score 0.95
- Q8U1R4 · AlphaFold monomer V2.0 prediction for ribosome biogenesis protein NOP10 (Q8U1R4) · a predicted model of the same protein · chain B against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7LWY0
- Every structure of UniProt Q8U1R4
- Every structure of UniProt Q8U029
- Elsewhere: RCSB PDB 3MQK · PDBe 3MQK · UniProt Q7LWY0 · UniProt Q8U1R4 · UniProt Q8U029
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