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Crystal structure of agrocybe aegerita lectin aal mutant R85A complexed with P-nitrophenyl tf disaccharide

Analyse Crystal structure of agrocybe aegerita lectin aal mutant R85A complexed with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3M3O
Type: protein
Length: 158 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Anti-tumor lectin
EC: 3.1.21.-
UniProt: Q6WY08
Ligands: NPO, A2G, GAL

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 53% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Anti-tumor lectin (EC 3.1.21.-)	protein	158	3% helix, 53% strand	Q6WY08

Ligands and binding sites

NPO · P-nitrophenol · ligand
A2G · 2-acetamido-2-deoxy-alpha-D-galactopyranose · sugar · chains A
GAL · beta-D-galactopyranose · sugar · chains A
BTB · 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

3M3O · Crystal Structure of Agrocybe aegerita lectin AAL mutant R85A complexed with… · the same entry in another collection · chain A against A, TM-score 1.00
Q6WY08 · AlphaFold monomer V2.0 prediction for anti-tumor lectin (Q6WY08) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6WY08
Elsewhere: RCSB PDB 3M3O · PDBe 3M3O · UniProt Q6WY08

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