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Structure of aquaporin-1 at 3.8 a resolution by electron crystallography

Analyse Structure of aquaporin-1 at 3.8 a resolution by electron crystallography in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1FQY
Type: protein
Length: 226 residues
Chains: 1
Method: electron crystallography
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Aquaporin-1
UniProt: P29972
Pockets: 3 · best druggability 0.72

Structure

electron crystallography · 1 distinct chain · 62% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Aquaporin-1	protein	226	62% helix, 0% strand	P29972

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	439	0.72	0.82	51	empty
2	338	0.65	0.80	30	empty
3	86	0.42	0.79	22	empty

Compared structures

1FQY · Structure of aquaporin-1 at 3.8 a resolution by electron crystallography · the same entry in another collection · chain A against A, TM-score 1.00
P29972 · AlphaFold monomer V2.0 prediction for aquaporin-1 (P29972) · a predicted model of the same protein · chain A against A, TM-score 0.89

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P29972
Elsewhere: RCSB PDB 1FQY · PDBe 1FQY · UniProt P29972

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