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Structure of HIV-1 GP120 with GP41-interactive region: layered architecture and basis of conformational mobility

Analyse Structure of HIV-1 GP120 with GP41-interactive region: layered architecture and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3JWD
Type
protein
Length
1,945 residues
Chains
8
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P01730

Structure

x-ray diffraction · 8 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein360——
C—protein184—P01730
L—protein213——
H—protein220——
B—protein354——
D—protein183—P01730
O—protein212——
P—protein219——

Compared structures

  • 3JWD · Structure of HIV-1 gp120 with gp41-Interactive Region: Layered Architecture and Basis of… · the same entry in another collection · chain P against P, TM-score 1.00
  • P01730 · AlphaFold monomer V2.0 prediction for T-cell surface glycoprotein CD4 (P01730) · a predicted model of the same protein · chain C against A, TM-score 0.92

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