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Solution structure of the REPS1 eh domain

Analyse Solution structure of the REPS1 eh domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1FI6
Type: protein
Length: 92 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Eh domain protein REPS1
UniProt: O54916
Ligands: CA
Pockets: 1 · best druggability 0.32

Structure

solution nmr · 1 distinct chain · 53% helix, 7% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Eh domain protein REPS1	protein	92	53% helix, 7% strand	O54916

Ligands and binding sites

CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	54	0.32	0.76	13	empty

Compared structures

1FI6 · Solution structure of the REPS1 eh domain · the same entry in another collection · chain A against A, TM-score 1.00
O54916 · AlphaFold monomer V2.0 prediction for RALBP1-associated eps domain- containing protein 1… · a predicted model of the same protein · chain A against A, TM-score 0.78

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O54916
Elsewhere: RCSB PDB 1FI6 · PDBe 1FI6 · UniProt O54916

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