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Crystal structure of the nudix domain of NUDT6

Analyse Crystal structure of the nudix domain of NUDT6 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3H95
Type: protein
Length: 161 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Nucleoside diphosphate-linked moiety X motif 6
UniProt: P53370

Structure

x-ray diffraction · 1 distinct chain · 26% helix, 39% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nucleoside diphosphate-linked moiety X motif 6	protein	161	26% helix, 39% strand	P53370

Ligands and binding sites

GOL · Glycerol · additive · 2 copies · chains A
FLC · Citrate anion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

3H95 · Crystal structure of the NUDIX domain of NUDT6 · the same entry in another collection · chain A against A, TM-score 1.00
P53370 · AlphaFold monomer V2.0 prediction for nucleoside diphosphate-linked moiety X motif 6… · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P53370
Elsewhere: RCSB PDB 3H95 · PDBe 3H95 · UniProt P53370

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