Research workbench
Structure of a putative bacteriophage protein from escherichia COLI str. K-12 substr. MG1655
Analyse Structure of a putative bacteriophage protein from escherichia COLI str. K-12… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3G27
- Type
- protein
- Length
- 81 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 82 prophage-derived uncharacterized protein ybco
- UniProt
- P68661
- Ligands
- ZN, CA
Structure
x-ray diffraction · 1 distinct chain · 38% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 82 prophage-derived uncharacterized protein ybco | protein | 81 | 38% helix, 10% strand | P68661 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
- CA · Calcium ion · metal · chains A
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 modified (engineered).
Compared structures
- 3G27 · Structure of a putative bacteriophage protein from Escherichia coli str. K-12 substr.… · the same entry in another collection · chain A against A, TM-score 1.00
- P68661 · AlphaFold monomer V2.0 prediction for putative nuclease ybco (P68661) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P68661
- Elsewhere: RCSB PDB 3G27 · PDBe 3G27 · UniProt P68661
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