Research workbench
Crystal structure of yeast PRP8, residues 1836-2092
Analyse Crystal structure of yeast PRP8, residues 1836-2092 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3E9O
- Type
- protein
- Length
- 255 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pre-mRNA-splicing factor 8
- UniProt
- P33334
- Pockets
- 3 · best druggability 0.48
Structure
x-ray diffraction · 1 distinct chain · 46% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-mRNA-splicing factor 8 | protein | 255 | 46% helix, 18% strand | P33334 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 106 | 0.48 | 0.80 | 15 | empty |
| 2 | 115 | 0.46 | 0.78 | 20 | empty |
| 3 | 118 | 0.38 | 0.74 | 18 | empty |
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 3E9O · Crystal Structure of Yeast Prp8, Residues 1836-2092 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P33334
- Elsewhere: RCSB PDB 3E9O · PDBe 3E9O · UniProt P33334
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