Research workbench
Crystal structure of flavin-containing putative monooxygenase (NP_373108.1) from staphylococcus aureus MU50 at 2.40 a resolution
Analyse Crystal structure of flavin-containing putative monooxygenase (NP_373108.1)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3D1C
- Type
- protein
- Length
- 358 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flavin-containing putative monooxygenase
- UniProt
- Q99R54
- Ligands
- FAD, UNL, SO4
- Pockets
- 3 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 30% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flavin-containing putative monooxygenase | protein | 358 | 30% helix, 22% strand | Q99R54 |
Ligands and binding sites
- FAD · Flavin-adenine dinucleotide · ligand · chains A
- UNL · Unknown ligand · ligand · chains A
- SO4 · Sulfate ion · ion · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 723 | 0.79 | 0.83 | 64 | FAD, UNL |
| 2 | 68 | 0.30 | 0.74 | 16 | empty |
| 3 | 53 | 0.28 | 0.75 | 11 | empty |
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 3D1C · Crystal structure of Flavin-containing Putative Monooxygenase (NP_373108.1) from… · the same entry in another collection · chain A against A, TM-score 1.00
- Q99R54 · AlphaFold monomer V2.0 prediction for putative flavoprotein monooxygenase (Q99R54) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q99R54
- Elsewhere: RCSB PDB 3D1C · PDBe 3D1C · UniProt Q99R54
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.