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Tim-4 in complex with phosphatidylserine

Analyse Tim-4 in complex with phosphatidylserine in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3BIB
Type: protein
Length: 109 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: T-cell immunoglobulin and mucin domain- containing protein 4
UniProt: Q6U7R4
Ligands: PSF, NA

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
X	T-cell immunoglobulin and mucin domain- containing protein 4	protein	109	6% helix, 45% strand	Q6U7R4

Ligands and binding sites

PSF · 1,2-dicaproyl-sn-phosphatidyl-L-serine · ligand · chains X
NA · Sodium ion · metal · chains X

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

3BIB · Tim-4 in complex with phosphatidylserine · the same entry in another collection · chain X against X, TM-score 1.00
Q6U7R4 · AlphaFold monomer V2.0 prediction for T-cell immunoglobulin and mucin domain-containing… · a predicted model of the same protein · chain X against A, TM-score 0.99

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6U7R4
Elsewhere: RCSB PDB 3BIB · PDBe 3BIB · UniProt Q6U7R4

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