Research workbench
Crystal structure of polygonatum cyrtonema lectin (pcl) complexed with monomannoside
Analyse Crystal structure of polygonatum cyrtonema lectin (pcl) complexed with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3A0D
- Type
- protein
- Length
- 110 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- MANNOSE/SIALIC acid-binding lectin
- UniProt
- Q8L568
- Ligands
- MMA, SO4
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | MANNOSE/SIALIC acid-binding lectin | protein | 110 | 0% helix, 40% strand | Q8L568 |
Ligands and binding sites
- MMA · methyl alpha-D-mannopyranoside · sugar · chains A
- SO4 · Sulfate ion · ion · 5 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 3A0D · Crystal Structure of Polygonatum cyrtonema lectin (PCL) complexed with monomannoside · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8L568
- Elsewhere: RCSB PDB 3A0D · PDBe 3A0D · UniProt Q8L568
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