Research workbench

The plug domain of the secy protein stablizes the closed state of the translocation channel and maintains a membrane seal

Analyse The plug domain of the secy protein stablizes the closed state of the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2YXQ
Type: protein
Length: 524 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q60175, Q57817, P60460

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	427	—	Q60175
B	—	protein	65	—	Q57817
C	—	protein	32	—	P60460

Compared structures

2YXQ · The plug domain of the SecY protein stablizes the closed state of the translocation… · the same entry in another collection · chain A against A, TM-score 1.00
Q60175 · AlphaFold monomer V2.0 prediction for protein translocase subunit secy (Q60175) · a predicted model of the same protein · chain A against A, TM-score 0.96
Q57817 · AlphaFold monomer V2.0 prediction for protein translocase subunit sece (Q57817) · a predicted model of the same protein · chain B against A, TM-score 0.88
P60460 · AlphaFold monomer V2.0 prediction for preprotein translocase subunit secg (P60460) · a predicted model of the same protein · chain C against A, TM-score 0.68

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q60175
Every structure of UniProt Q57817
Every structure of UniProt P60460
Elsewhere: RCSB PDB 2YXQ · PDBe 2YXQ · UniProt Q60175 · UniProt Q57817 · UniProt P60460

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