Research workbench
Structure of segment mvggvvia from the amyloid-beta peptide (ab, residues 35-42), alternate polymorph 2
Analyse Structure of segment mvggvvia from the amyloid-beta peptide (ab, residues… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2Y3L
- Type
- protein
- Length
- 32 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Amyloid beta A4 protein
- UniProt
- P05067
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 63% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, G | Amyloid beta A4 protein | protein | 8 | 0% helix, 63% strand | P05067 |
Interfaces
6 interfaces between chains.
- B–G · 304 Ų buried · 6 hydrogen bonds · protein-protein
- A–C · 300 Ų buried · 8 hydrogen bonds · protein-protein
- C–G · 161 Ų buried · 0 hydrogen bonds · protein-protein
- A–B · 154 Ų buried · 0 hydrogen bonds · protein-protein
- A–G · 112 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 2Y3L · Structure of segment MVGGVVIA from the amyloid-beta peptide (Ab, residues 35-42)… · the same entry in another collection · chain G against G, TM-score 1.00
- P05067 · AlphaFold monomer V2.0 prediction for amyloid-beta precursor protein (P05067) · a predicted model of the same protein · chain B against A, TM-score 0.69
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P05067
- Elsewhere: RCSB PDB 2Y3L · PDBe 2Y3L · UniProt P05067
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.