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Circular permutation provides an evolutionary link between two families of calcium-dependent carbohydrate binding modules

Analyse Circular permutation provides an evolutionary link between two families of… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2XHH
Type
protein
Length
119 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Carbohydrate binding module
Ligands
LMR, CA

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 55% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACarbohydrate binding moduleprotein1193% helix, 55% strand—

Ligands and binding sites

  • LMR · (2S)-2-hydroxybutanedioic acid · ligand · chains A
  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

  • 2XHH · Circular permutation provides an evolutionary link between two families of… · the same entry in another collection · chain A against A, TM-score 1.00

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