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Structure of a single domain camelid antibody fragment in complex with a C-terminal peptide of alpha-synuclein
Analyse Structure of a single domain camelid antibody fragment in complex with a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2X6M
- Type
- protein
- Length
- 132 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Heavy chain variable domain from dromedary; Alpha-synuclein peptide
- UniProt
- P37840
Structure
x-ray diffraction · 2 distinct chains · 9% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Heavy chain variable domain from dromedary | protein | 126 | 10% helix, 49% strand | — |
| B | Alpha-synuclein peptide | protein | 6 | 0% helix, 0% strand | P37840 |
Interfaces
1 interface between chains.
- A–B · 333 Ų buried · 11 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 2X6M · Structure of a single domain camelid antibody fragment in complex with a C-terminal… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P37840
- Elsewhere: RCSB PDB 2X6M · PDBe 2X6M · UniProt P37840
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