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Ccdb, a topoisomerase poison from E. COLI

Analyse Ccdb, a topoisomerase poison from E. COLI in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2VUB
Type: protein
Length: 788 residues
Chains: 8
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P62554

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C, F, H	—	protein	101	—	P62554
B, D, E, G	—	protein	96	—	P62554

Compared structures

2VUB · Ccdb, a topoisomerase poison from E. COLI · the same entry in another collection · chain H against H, TM-score 1.00
P62554 · AlphaFold monomer V2.0 prediction for toxin ccdb (P62554) · a predicted model of the same protein · chain F against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P62554
Elsewhere: RCSB PDB 2VUB · PDBe 2VUB · UniProt P62554

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