UniProt P62554
Toxin CcdB (P62554)
Toxin CcdB (UniProt P62554): 18 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P62554
- Protein
- Toxin CcdB
- Experimental structures
- 18
- Predicted models
- 1
- Ligands
- 1
Structures
19 records of P62554 in the MolNFT archive: 18 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1VUB | Ccdb, a topoisomerase poison from E. COLI | x-ray diffraction | A, B, C, D | — | — |
| 1VUB | Ccdb, a topoisomerase poison from E. COLI | x-ray diffraction | A, B, C, D | — | — |
| 2VUB | Ccdb, a topoisomerase poison from E. COLI | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 2VUB | Ccdb, a topoisomerase poison from E. COLI | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 3G7Z | CcdB dimer in complex with two C-terminal CcdA domains | x-ray diffraction | A, B | — | — |
| 3G7Z | Ccdb dimer in complex with two C-terminal ccda domains | x-ray diffraction | A, B | — | — |
| 3HPW | CcdB dimer in complex with one C-terminal CcdA domain | x-ray diffraction | A, B | — | — |
| 3HPW | Ccdb dimer in complex with one C-terminal ccda domain | x-ray diffraction | A, B | — | — |
| 3VUB | Ccdb, a topoisomerase poison from E. COLI | x-ray diffraction | A | — | — |
| 3VUB | Ccdb, a topoisomerase poison from E. COLI | x-ray diffraction | A | — | — |
| 4VUB | Ccdb, a topoisomerase poison from escherichia COLI | x-ray diffraction | A | — | — |
| 4VUB | Ccdb, a topoisomerase poison from escherichia COLI | x-ray diffraction | A | — | — |
| 7EPG | Crystal structure of E.coli CcdB mutant S12G | x-ray diffraction | A | CL | — |
| 7EPG | Crystal structure of E.COLI ccdb mutant S12G | x-ray diffraction | A | CL | — |
| 7EPI | Crystal structure of E.coli CcdB mutant S60E | x-ray diffraction | A | CL | — |
| 7EPI | Crystal structure of E.COLI ccdb mutant S60E | x-ray diffraction | A | CL | — |
| 7EPJ | Crystal structure of E.coli CcdB mutant V46L | x-ray diffraction | A | CL | — |
| 7EPJ | Crystal structure of E.COLI ccdb mutant V46L | x-ray diffraction | A | CL | — |
| P62554 | AlphaFold monomer V2.0 prediction for toxin ccdb (P62554) | predicted | A | — | — |
Ligands
- CL · Chloride ion · in 6 records
Experiment against prediction
- 1VUB chain C against the predicted model P62554: TM-score 0.98, RMSD 0.53 Å
- 1VUB chain C against the predicted model P62554: TM-score 0.98, RMSD 0.53 Å
- 3HPW chain B against the predicted model P62554: TM-score 0.98, RMSD 0.57 Å
- 3HPW chain B against the predicted model P62554: TM-score 0.98, RMSD 0.57 Å
- 3G7Z chain A against the predicted model P62554: TM-score 0.98, RMSD 0.57 Å
- 3G7Z chain A against the predicted model P62554: TM-score 0.98, RMSD 0.57 Å
- 1VUB chain A against the predicted model P62554: TM-score 0.98, RMSD 0.56 Å
- 1VUB chain A against the predicted model P62554: TM-score 0.98, RMSD 0.56 Å
- 7EPG chain A against the predicted model P62554: TM-score 0.98, RMSD 0.60 Å
- 7EPG chain A against the predicted model P62554: TM-score 0.98, RMSD 0.60 Å
Elsewhere
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