Research workbench
Structure of the substrate-free form of the rebeccamycin biosynthetic enzyme rebc
Analyse Structure of the substrate-free form of the rebeccamycin biosynthetic enzyme… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2R0C
- Type
- protein
- Length
- 509 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rebc
- UniProt
- Q8KI25
- Ligands
- FAD, CL
- Pockets
- 3 · best druggability 0.83
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rebc | protein | 509 | 32% helix, 26% strand | Q8KI25 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1053 | 0.83 | 0.84 | 125 | FAD |
| 2 | 100 | 0.41 | 0.77 | 17 | empty |
| 3 | 98 | 0.40 | 0.77 | 22 | empty |
Compared structures
- 2R0C · Structure of the substrate-free form of the rebeccamycin biosynthetic enzyme REBC · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8KI25
- Elsewhere: RCSB PDB 2R0C · PDBe 2R0C · UniProt Q8KI25
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