Research workbench
Solution structure of PICK1 PDZ in complex with the carboxyl tail peptide of GLUR2
Analyse Solution structure of PICK1 PDZ in complex with the carboxyl tail peptide of… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2PKU
- Type
- protein
- Length
- 92 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Prkca-binding protein; Peptide (GLU)(SER)(VAL)(LYS)(ILE)
- UniProt
- Q9EP80
Structure
solution nmr · 2 distinct chains · 16% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Prkca-binding protein | protein | 87 | 17% helix, 36% strand | Q9EP80 |
| B | Peptide (GLU)(SER)(VAL)(LYS)(ILE) | protein | 5 | 0% helix, 20% strand | — |
Interfaces
1 interface between chains.
- A–B · 417 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 2PKU · Solution structure of PICK1 PDZ in complex with the carboxyl tail peptide of GluR2 · the same entry in another collection · chain A against A, TM-score 1.00
- Q9EP80 · AlphaFold monomer V2.0 prediction for prkca-binding protein (Q9EP80) · a predicted model of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9EP80
- Elsewhere: RCSB PDB 2PKU · PDBe 2PKU · UniProt Q9EP80
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