Research workbench
Structural basis for a novel interaction between AIP4 and beta-pix
Analyse Structural basis for a novel interaction between AIP4 and beta-pix in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2P4R
- Type
- protein
- Length
- 71 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rho guanine nucleotide exchange factor 7; E3 ubiquitin-protein ligase itchy homolog
- EC
- 6.3.2.-
- UniProt
- O55043, Q96J02
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains · 4% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rho guanine nucleotide exchange factor 7 | protein | 55 | 5% helix, 53% strand | O55043 |
| T | E3 ubiquitin-protein ligase itchy homolog (EC 6.3.2.-) | protein | 16 | 0% helix, 0% strand | Q96J02 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–T · 679 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
- 2P4R · Structural basis for a novel interaction between AIP4 and beta-PIX · the same entry in another collection · chain A against A, TM-score 1.00
- O55043 · AlphaFold monomer V2.0 prediction for rho guanine nucleotide exchange factor 7 (O55043) · a predicted model of the same protein · chain A against A, TM-score 0.97
- Q96J02 · AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase itchy homolog (Q96J02) · a predicted model of the same protein · chain T against A, TM-score 0.21
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O55043
- Every structure of UniProt Q96J02
- Elsewhere: RCSB PDB 2P4R · PDBe 2P4R · UniProt O55043 · UniProt Q96J02
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