Research workbench
Crystal structure of chloroplast ftsy from arabidopsis thaliana
Analyse Crystal structure of chloroplast ftsy from arabidopsis thaliana in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2OG2
- Type
- protein
- Length
- 302 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative signal recognition particle receptor
- UniProt
- O80842
- Ligands
- MG
- Pockets
- 1 · best druggability 0.32
Structure
x-ray diffraction · 1 distinct chain · 56% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative signal recognition particle receptor | protein | 302 | 56% helix, 13% strand | O80842 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 66 | 0.32 | 0.75 | 20 | empty |
Compared structures
- 2OG2 · Crystal structure of chloroplast FtsY from Arabidopsis thaliana · the same entry in another collection · chain A against A, TM-score 1.00
- O80842 · AlphaFold monomer V2.0 prediction for cell division protein ftsy homolog, chloroplastic… · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O80842
- Elsewhere: RCSB PDB 2OG2 · PDBe 2OG2 · UniProt O80842
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