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Crystal structure of calcium binding protein 1 from entamoeba histolytica: a novel arrangement of ef hand motifs

Analyse Crystal structure of calcium binding protein 1 from entamoeba histolytica: a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2NXQ
Type
protein
Length
130 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Calcium-binding protein
UniProt
P38505
Ligands
CA

Structure

x-ray diffraction · 2 distinct chains · 63% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACalcium-binding proteinprotein6662% helix, 0% strandP38505
BCalcium-binding proteinprotein6464% helix, 0% strandP38505

Ligands and binding sites

  • CA · Calcium ion · metal · 4 copies · chains A, B
  • ACT · Acetate ion · additive · 5 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 2NXQ · Crystal structure of calcium binding protein 1 from Entamoeba histolytica: a novel… · the same entry in another collection · chain A against A, TM-score 1.00
  • P38505 · AlphaFold monomer V2.0 prediction for calcium-binding protein (P38505) · a predicted model of the same protein · chain A against A, TM-score 0.46

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