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Backbone fold of human small ubiquitin like modifier protein-1 (sumo- 1) based on PROT3D-NMR approach.
Analyse Backbone fold of human small ubiquitin like modifier protein-1 (sumo- 1) based… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2MW5
- Type
- protein
- Length
- 97 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Small ubiquitin-related modifier 1
- UniProt
- P63165
- Pockets
- 1 · best druggability 0.58
Structure
solution nmr · 1 distinct chain · 20% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Small ubiquitin-related modifier 1 | protein | 97 | 20% helix, 13% strand | P63165 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 102 | 0.58 | 0.86 | 18 | empty |
Compared structures
- 2MW5 · Backbone fold of Human Small Ubiquitin like Modifier protein-1 (SUMO-1) based on… · the same entry in another collection · chain A against A, TM-score 1.00
- P63165 · AlphaFold monomer V2.0 prediction for small ubiquitin-related modifier 1 (P63165) · a predicted model of the same protein · chain A against A, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P63165
- Elsewhere: RCSB PDB 2MW5 · PDBe 2MW5 · UniProt P63165
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