Research workbench

Solution structure of a proteasome related subunit C terminal domain

Analyse Solution structure of a proteasome related subunit C terminal domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2MRI
Type: protein
Length: 176 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 26S proteasome regulatory subunit RPN9
UniProt: Q04062
Pockets: 1 · best druggability 0.38

Structure

solution nmr · 1 distinct chain · 65% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	26S proteasome regulatory subunit RPN9	protein	176	65% helix, 9% strand	Q04062

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	80	0.38	0.77	15	empty

Compared structures

2MRI · Solution structure of a proteasome related subunit C terminal domain · the same entry in another collection · chain A against A, TM-score 1.00
Q04062 · AlphaFold monomer V2.0 prediction for 26S proteasome regulatory subunit RPN9 (Q04062) · a predicted model of the same protein · chain A against A, TM-score 0.90

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q04062
Elsewhere: RCSB PDB 2MRI · PDBe 2MRI · UniProt Q04062

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.