Research workbench
Tetra-O-galnac glycosylated mucin sequence from alpha dystroglycan mucin domain
Analyse Tetra-O-galnac glycosylated mucin sequence from alpha dystroglycan mucin domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2MK7
- Type
- protein
- Length
- 9 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Alpha-dystroglycan
- UniProt
- Q14118
- Ligands
- ACE, A2G, NH2
Structure
solution nmr · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alpha-dystroglycan | protein | 9 | 0% helix, 0% strand | Q14118 |
Ligands and binding sites
- ACE · Acetyl group · ligand · chains A
- A2G · 2-acetamido-2-deoxy-alpha-D-galactopyranose · sugar · 4 copies · chains A
- NH2 · Amino group · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 4 glycan, 1 covalent (O-glycosylation, covalent ligand).
Compared structures
- 2MK7 · Tetra-O-GalNAc glycosylated mucin sequence from alpha dystroglycan mucin domain · the same entry in another collection · chain A against A, TM-score 1.00
- Q14118 · AlphaFold monomer V2.0 prediction for dystroglycan (Q14118) · a predicted model of the same protein · chain A against A, TM-score 0.47
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q14118
- Elsewhere: RCSB PDB 2MK7 · PDBe 2MK7 · UniProt Q14118
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