Research workbench
Structure of the uba domain of human NBR1 in complex with ubiquitin
Analyse Structure of the uba domain of human NBR1 in complex with ubiquitin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2MJ5
- Type
- protein
- Length
- 128 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Polyubiquitin-C; Next to BRCA1 gene 1 protein
- UniProt
- P0CG48, Q14596
Structure
solution nmr · 2 distinct chains · 34% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polyubiquitin-C | protein | 76 | 21% helix, 34% strand | P0CG48 |
| B | Next to BRCA1 gene 1 protein | protein | 52 | 52% helix, 0% strand | Q14596 |
Interfaces
1 interface between chains.
- A–B · 679 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 2MJ5 · Structure of the UBA Domain of Human NBR1 in Complex with Ubiquitin · the same entry in another collection · chain A against A, TM-score 1.00
- Q14596 · AlphaFold monomer V2.0 prediction for next to BRCA1 gene 1 protein (Q14596) · a predicted model of the same protein · chain B against A, TM-score 0.78
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CG48
- Every structure of UniProt Q14596
- Elsewhere: RCSB PDB 2MJ5 · PDBe 2MJ5 · UniProt P0CG48 · UniProt Q14596
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