Research workbench
Solution structure of CA2+/CNA1 peptide-bound ycam
Analyse Solution structure of CA2+/CNA1 peptide-bound ycam in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2LHI
- Type
- protein
- Length
- 176 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- CALMODULIN,SERINE/THREONINE-protein phosphatase 2B catalytic subunit A1
- UniProt
- P06787, P23287
- Ligands
- CA
- Pockets
- 1 · best druggability 0.44
Structure
solution nmr · 1 distinct chain · 53% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | CALMODULIN,SERINE/THREONINE-protein phosphatase 2B catalytic subunit A1 | protein | 176 | 53% helix, 2% strand | P06787, P23287 |
Ligands and binding sites
- CA · Calcium ion · metal · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 134 | 0.44 | 0.76 | 18 | empty |
Compared structures
- 2LHI · Solution structure of Ca2+/CNA1 peptide-bound yCaM · the same entry in another collection · chain A against A, TM-score 1.00
- P06787 · AlphaFold monomer V2.0 prediction for calmodulin (P06787) · a predicted model of the same protein · chain A against A, TM-score 0.42
- P23287 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein phosphatase 2B catalytic… · a predicted model of the same protein · chain A against A, TM-score 0.31
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06787
- Every structure of UniProt P23287
- Elsewhere: RCSB PDB 2LHI · PDBe 2LHI · UniProt P06787 · UniProt P23287
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