Research workbench
Solution NMR structure of human polymerase iota UBM2 in complex with ubiquitin
Analyse Solution NMR structure of human polymerase iota UBM2 in complex with ubiquitin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2KTF
- Type
- protein
- Length
- 108 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ubiquitin; DNA polymerase iota
- UniProt
- P62988, Q9UNA4
Structure
solution nmr · 2 distinct chains · 35% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin | protein | 76 | 24% helix, 37% strand | P62988 |
| B | DNA polymerase iota | protein | 32 | 63% helix, 0% strand | Q9UNA4 |
Interfaces
1 interface between chains.
- A–B · 737 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 2KTF · Solution NMR structure of human polymerase iota UBM2 in complex with ubiquitin · the same entry in another collection · chain A against A, TM-score 1.00
- Q9UNA4 · AlphaFold monomer V2.0 prediction for DNA polymerase iota (Q9UNA4) · a predicted model of the same protein · chain B against A, TM-score 0.66
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P62988
- Every structure of UniProt Q9UNA4
- Elsewhere: RCSB PDB 2KTF · PDBe 2KTF · UniProt P62988 · UniProt Q9UNA4
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