Research workbench
Solution NMR structure of human E2-like ubiquitin-fold modifier conjugating enzyme 1 (UFC1). northeast structural genomics consortium target HR41
Analyse Solution NMR structure of human E2-like ubiquitin-fold modifier conjugating… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2K07
- Type
- protein
- Length
- 175 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- UFM1-conjugating enzyme 1
- UniProt
- Q9Y3C8
- Pockets
- 2 · best druggability 0.46
Structure
solution nmr · 1 distinct chain · 36% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UFM1-conjugating enzyme 1 | protein | 175 | 36% helix, 16% strand | Q9Y3C8 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 189 | 0.46 | 0.74 | 33 | empty |
| 2 | 95 | 0.38 | 0.75 | 14 | empty |
Compared structures
- 2K07 · Solution NMR structure of human E2-like ubiquitin-fold modifier conjugating enzyme 1… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9Y3C8 · AlphaFold monomer V2.0 prediction for ubiquitin-fold modifier- conjugating enzyme 1… · a predicted model of the same protein · chain A against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y3C8
- Elsewhere: RCSB PDB 2K07 · PDBe 2K07 · UniProt Q9Y3C8
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