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Structure of the catalytic domain of mouse manic fringe in complex with udp and manganese
Analyse Structure of the catalytic domain of mouse manic fringe in complex with udp and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2J0B
- Type
- protein
- Length
- 243 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Beta-1,3-N-acetylglucosaminyltransferase manic fringe
- EC
- 2.4.1.222
- UniProt
- O09008
- Ligands
- UDP, K, MN, SO4
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta-1,3-N-acetylglucosaminyltransferase manic fringe (EC 2.4.1.222) | protein | 243 | 39% helix, 19% strand | O09008 |
Ligands and binding sites
- UDP · Uridine-5'-diphosphate · ligand · chains A
- K · Potassium ion · metal · chains A
- MN · Manganese (II) ion · metal · chains A
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 2J0B · Structure of the catalytic domain of mouse Manic Fringe in complex with UDP and manganese · the same entry in another collection · chain A against A, TM-score 1.00
- O09008 · AlphaFold monomer V2.0 prediction for beta-1,3-N-acetylglucosaminyltransferase manic… · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O09008
- Elsewhere: RCSB PDB 2J0B · PDBe 2J0B · UniProt O09008
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