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Structure of yeast dcn-1

Analyse Structure of yeast dcn-1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2IS9
Type: protein
Length: 204 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Defective in cullin neddylation protein 1
UniProt: Q12395
Ligands: PT, CL

Structure

x-ray diffraction · 1 distinct chain · 63% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Defective in cullin neddylation protein 1	protein	204	63% helix, 4% strand	Q12395

Ligands and binding sites

PT · Platinum (II) ion · metal · chains A
CL · Chloride ion · ion · 4 copies · chains A
MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

2IS9 · Structure of yeast DCN-1 · the same entry in another collection · chain A against A, TM-score 1.00
Q12395 · AlphaFold monomer V2.0 prediction for defective in cullin neddylation protein 1 (Q12395) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q12395
Elsewhere: RCSB PDB 2IS9 · PDBe 2IS9 · UniProt Q12395

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