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Crystal structure of the response regulator protein mtra from mycobacterium tuberculosis

Analyse Crystal structure of the response regulator protein mtra from mycobacterium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
2GWR
Type
protein
Length
225 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
DNA-binding response regulator mtra
UniProt
C6DXJ2
Ligands
CA
Pockets
1 · best druggability 0.49

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 22% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ADNA-binding response regulator mtraprotein22538% helix, 22% strandC6DXJ2

Ligands and binding sites

  • CA · Calcium ion · metal · chains A
  • GOL · Glycerol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12010.490.7636GOL

Modifications

Observed in the structure: 7 modified (engineered).

Compared structures

  • 2GWR · Crystal structure of the response regulator protein mtrA from Mycobacterium Tuberculosis · the same entry in another collection · chain A against A, TM-score 1.00

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