Research workbench
Crystal structure of a putative formylmethanofuran dehydrogenase subunit E (TA1109) from thermoplasma acidophilum at 1.87 a resolution
Analyse Crystal structure of a putative formylmethanofuran dehydrogenase subunit E… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2GVI
- Type
- protein
- Length
- 201 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Conserved hypothetical protein
- Ligands
- UNL, ZN
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Conserved hypothetical protein | protein | 201 | 40% helix, 20% strand | — |
Ligands and binding sites
- UNL · Unknown ligand · ligand · chains A
- ZN · Zinc ion · metal · 5 copies · chains A
- ACY · Acetic acid · additive · 8 copies · chains A
- EDO · 1,2-ethanediol · additive · 6 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 6 modified, 1 covalent (engineered, covalent ligand).
Compared structures
- 2GVI · Crystal structure of a putative formylmethanofuran dehydrogenase subunit e (ta1109) from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2GVI · PDBe 2GVI
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