Research workbench
Structure of 10:0-acp (protein with docked fatty acid)
Analyse Structure of 10:0-acp (protein with docked fatty acid) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2FVF
- Type
- protein
- Length
- 82 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Acyl carrier protein
- UniProt
- P07854
- Ligands
- PNS, DKA
- Pockets
- 1 · best druggability 0.61
Structure
solution nmr · 1 distinct chain · 62% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Acyl carrier protein | protein | 82 | 62% helix, 2% strand | P07854 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 144 | 0.61 | 0.84 | 24 | DKA |
Modifications
Observed in the structure: 1 cofactor (phosphopantetheinylation).
Compared structures
- 2FVF · Structure of 10:0-ACP (protein with docked fatty acid) · the same entry in another collection · chain A against A, TM-score 1.00
- P07854 · AlphaFold monomer V2.0 prediction for acyl carrier protein 1, chloroplastic (P07854) · a predicted model of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P07854
- Elsewhere: RCSB PDB 2FVF · PDBe 2FVF · UniProt P07854
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