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Solution structure of wheat ns-ltp complexed with prostaglandin B2.

Analyse Solution structure of wheat ns-ltp complexed with prostaglandin B2. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1CZ2
Type: protein
Length: 90 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Nonspecific lipid transfer protein
UniProt: P24296
Ligands: E2P
Pockets: 1 · best druggability 0.83

Structure

solution nmr · 1 distinct chain · 56% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nonspecific lipid transfer protein	protein	90	56% helix, 0% strand	P24296

Ligands and binding sites

E2P · Prostaglandin B2 · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	258	0.83	0.94	36	E2P

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

1CZ2 · Solution structure of wheat ns-ltp complexed with prostaglandin B2. · the same entry in another collection · chain A against A, TM-score 1.00
P24296 · AlphaFold monomer V2.0 prediction for non-specific lipid-transfer protein (P24296) · a predicted model of the same protein · chain A against A, TM-score 0.78

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P24296
Elsewhere: RCSB PDB 1CZ2 · PDBe 1CZ2 · UniProt P24296

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