MolNFT v1 · #266119 · protein
AlphaFold monomer V2.0 prediction for non-specific lipid-transfer protein (P24296)
P24296: “AlphaFold monomer V2.0 prediction for non-specific lipid-transfer protein (P24296)”. 1 pocket (best druggability 0.81). MolNFT v1 #266119 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P24296
- Type
- protein
- Length
- 113 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Non-specific lipid-transfer protein
- UniProt
- P24296
- Pockets
- 1 · best druggability 0.81
Structure
1 distinct chain · 64% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Non-specific lipid-transfer protein | protein | 113 | 64% helix, 0% strand | P24296 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 270 | 0.81 | 0.92 | 35 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 1BWO · The crystal structure of wheat non-specific transfer protein complexed with two molecules… · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 1BWO · The crystal structure of wheat non-specific transfer protein complexed with two molecules… · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 1GH1 · NMR structures of wheat nonspecific lipid transfer protein · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 1GH1 · NMR structures of wheat nonspecific lipid transfer protein · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 1CZ2 · Solution structure of wheat ns-ltp complexed with prostaglandin B2. · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 1CZ2 · Solution structure of wheat ns-ltp complexed with prostaglandin B2. · an experimental structure of the same protein · chain A against A, TM-score 0.65
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P24296
- Elsewhere: UniProt P24296 · AlphaFold DB P24296
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