Research workbench
Solution structure of second PDZ domain of PDZ domain containing protein 1
Analyse Solution structure of second PDZ domain of PDZ domain containing protein 1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2EEI
- Type
- protein
- Length
- 106 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- PDZ domain-containing protein 1
- UniProt
- Q5T2W1
- Pockets
- 1 · best druggability 0.29
Structure
solution nmr · 1 distinct chain · 15% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PDZ domain-containing protein 1 | protein | 106 | 15% helix, 23% strand | Q5T2W1 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 58 | 0.29 | 0.74 | 11 | empty |
Compared structures
- 2EEI · Solution Structure of Second PDZ domain of PDZ Domain Containing Protein 1 · the same entry in another collection · chain A against A, TM-score 1.00
- Q5T2W1 · AlphaFold monomer V2.0 prediction for NA(+)/H(+) exchange regulatory cofactor nhe-RF3… · a predicted model of the same protein · chain A against A, TM-score 0.76
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5T2W1
- Elsewhere: RCSB PDB 2EEI · PDBe 2EEI · UniProt Q5T2W1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.