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Crystal structure of a pua domain (APE0525) from the aeropyrum pernix K1 (tartrate complex)

Analyse Crystal structure of a pua domain (APE0525) from the aeropyrum pernix K1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2CX1
Type: protein
Length: 184 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein APE0525
UniProt: Q9YEQ6
Pockets: 1 · best druggability 0.40

Structure

x-ray diffraction · 1 distinct chain · 28% helix, 39% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical protein APE0525	protein	184	28% helix, 39% strand	Q9YEQ6

Ligands and binding sites

TLA · L(+)-tartaric acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	102	0.40	0.76	21	empty

Modifications

Observed in the structure: 3 modified (engineered).

Compared structures

2CX1 · Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (tartrate… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9YEQ6
Elsewhere: RCSB PDB 2CX1 · PDBe 2CX1 · UniProt Q9YEQ6

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