Research workbench
Crystal structure of demetallized concanavalin a. the metal- binding region
Analyse Crystal structure of demetallized concanavalin a. the metal- binding region in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1CN1
- Type
- protein
- Length
- 474 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Concanavalin a
- UniProt
- P02866
- Pockets
- 2 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Concanavalin a | protein | 237 | 3% helix, 30% strand | P02866 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 70 | 0.73 | 0.98 | 20 | empty |
| 2 | 63 | 0.73 | 0.98 | 23 | empty |
Interfaces
1 interface between chains.
- A–B · 1129 Ų buried · 26 hydrogen bonds · protein-protein
Compared structures
- 1CN1 · Crystal structure of demetallized concanavalin a. the metal-binding region · the same entry in another collection · chain A against A, TM-score 1.00
- P02866 · AlphaFold monomer V2.0 prediction for concanavalin-a (P02866) · a predicted model of the same protein · chain A against A, TM-score 0.50
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02866
- Elsewhere: RCSB PDB 1CN1 · PDBe 1CN1 · UniProt P02866
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