Research workbench
Zinc-binding domain of ALZHEIMER'S disease amyloid beta-peptide complexed with a zinc (II) cation
Analyse Zinc-binding domain of ALZHEIMER'S disease amyloid beta-peptide complexed with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1ZE9
- Type
- protein
- Length
- 16 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 16-mer from ALZHEIMER'S disease amyloid protein
- UniProt
- P05067
- Ligands
- ACE, ZN, NH2
Structure
solution nmr · 1 distinct chain · 19% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 16-mer from ALZHEIMER'S disease amyloid protein | protein | 16 | 19% helix, 0% strand | P05067 |
Ligands and binding sites
- ACE · Acetyl group · ligand · chains A
- ZN · Zinc ion · metal · chains A
- NH2 · Amino group · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 covalent (covalent ligand).
Compared structures
- 1ZE9 · Zinc-binding domain of Alzheimer's disease amyloid beta-peptide complexed with a zinc… · the same entry in another collection · chain A against A, TM-score 1.00
- P05067 · AlphaFold monomer V2.0 prediction for amyloid-beta precursor protein (P05067) · a predicted model of the same protein · chain A against A, TM-score 0.28
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P05067
- Elsewhere: RCSB PDB 1ZE9 · PDBe 1ZE9 · UniProt P05067
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