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Yeast cu, zn superoxide dismutase with the reduced bridge broken

Analyse Yeast cu, zn superoxide dismutase with the reduced bridge broken in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1YSO
Type
protein
Length
153 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Yeast cu, zn superoxide dismutase
EC
1.15.1.1
UniProt
P00445
Ligands
CU1, ZN

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 37% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AYeast cu, zn superoxide dismutase (EC 1.15.1.1)protein1535% helix, 37% strandP00445

Ligands and binding sites

  • CU1 · Copper (I) ion · metal · chains A
  • ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

  • 1YSO · Yeast cu, zn superoxide dismutase with the reduced bridge broken · the same entry in another collection · chain A against A, TM-score 1.00
  • P00445 · AlphaFold monomer V2.0 prediction for superoxide dismutase [cu-zn] (P00445) · a predicted model of the same protein · chain A against A, TM-score 0.99

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