Research workbench
Crystal structure of iron-free serratia marcescens sfua
Analyse Crystal structure of iron-free serratia marcescens sfua in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1XVY
- Type
- protein
- Length
- 307 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sfua
- UniProt
- P21408
- Pockets
- 2 · best druggability 0.50
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sfua | protein | 307 | 47% helix, 17% strand | P21408 |
Ligands and binding sites
- CIT · Citric acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.50 | 0.86 | 17 | empty |
| 2 | 73 | 0.29 | 0.74 | 22 | CIT |
Compared structures
- 1XVY · Crystal Structure of iron-free Serratia marcescens SfuA · the same entry in another collection · chain A against A, TM-score 1.00
- P21408 · AlphaFold monomer V2.0 prediction for FE(3+)-binding periplasmic protein (P21408) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P21408
- Elsewhere: RCSB PDB 1XVY · PDBe 1XVY · UniProt P21408
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